Protein Alignment rnf128 and Rnf128

DIOPT Version :9

• Sequence 1: XP_012824820.2
• Gene: rnf128 / 100145171
• XenbaseID: XB-GENE-877067
• Length: 403
• Species: Xenopus tropicalis
• Sequence 2: NP_001166820.1
• Gene: Rnf128 / 315911
• RGDID: 1566282
• Length: 428
• Species: Rattus norvegicus
• Alignment Length: 393
• Identity: 236/393 - (60%)
• Similarity: 292/393 - (74%)
• Gaps: 19/393 - (4%)

 Frog    28 GADTLWTANVNYSYVYD----NRTYGEEGEIGVFGQDSPIERAAGLVVLPKSERTFTACKDNTNF 88
            ||:.:|||.:|.|:...    |||..|..|.||:|||||:|..:|::|.|.......||..:|||
  Rat    38 GAEAVWTAYLNVSWRVPHPGVNRTVWELSEEGVYGQDSPLEPVSGVLVPPDGPGALNACNPHTNF 102

 Frog    89 SVPHNWNG----PWIALILRGGGCTFTEKINRAAERGARAVVVYN-NGMDNEVFEMSHPGTKDTV 148
            :||..|..    .|:|||.|||||||.:||:.|.||||...|::| .|..|||..|||||..|.|
  Rat   103 TVPTVWGSTVQVSWLALIQRGGGCTFADKIHLAYERGASGAVIFNFPGTRNEVIPMSHPGAGDIV 167

 Frog   149 AIMIGNIKGNEIVEVIKGGMQVMMVIEVGRKHGSWINHYSIFFVSVSFFIVTAATVGYFIFYSAR 213
            ||||||:||.:|::.|:.|:||.||||||:|||.|:||||||||||||||:||||||||||||||
  Rat   168 AIMIGNLKGTKILQSIQRGIQVTMVIEVGKKHGPWVNHYSIFFVSVSFFIITAATVGYFIFYSAR 232

 Frog   214 RWRLTRAQNKKMKQLKAEAKKAIGKLQLRTIKQGDKVLGPDGDSCAVCIEPYKPSDVVRILTCNH 278
            |.|..|||::|.:||||:||||||:|||||:|||||.:||||||||||||.|||:||||||||||
  Rat   233 RLRNARAQSRKQRQLKADAKKAIGRLQLRTLKQGDKEIGPDGDSCAVCIELYKPNDVVRILTCNH 297

 Frog   279 FFHKNCIDPWLLEHRTCPMCKCDILKSLGIAED-EEETTSAAIPSVSSELQRSTVQTIEEENRSE 342
            .|||.|:|||||||||||||||||||:|||..| |:.:.|..:| ||:|.. :|....||:||||
  Rat   298 IFHKTCVDPWLLEHRTCPMCKCDILKALGIEVDVEDGSVSLQVP-VSNEAS-NTASPHEEDNRSE 360

 Frog   343 MASSGYASVRGGDEP--VDEGQHIYENTELVHNEASATSIEVLPHVDNPGFE-----SEDVHVHE 400
            .||||||||:|.|||  .:..|...||.:||::||::.:::|:||||||.||     .:::.|.|
  Rat   361 TASSGYASVQGADEPPLEEHAQSANENLQLVNHEANSVAVDVVPHVDNPTFEEDETPDQEMAVRE 425

 Frog   401 MKS 403
            :||
  Rat   426 VKS 428

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rnf128	XP_012824820.2	PA_GRAIL_like	38..174	CDD:239037	71/144 (49%)
		COG5540	<208..302	CDD:227827	76/93 (82%)
		RING-H2_RNF128_like	256..304	CDD:319716	42/47 (89%)
Rnf128	NP_001166820.1	PA_GRAIL_like	48..193	CDD:239037	71/144 (49%)
		zf-RING_2	275..318	CDD:290367	37/42 (88%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	154	1.000	Domainoid score	I19507
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	426	1.000	Inparanoid score	I8280
OMA	1	1.010	-	-		QHG39235
OrthoDB	1	1.010	-	-		D1487241at2759
OrthoFinder	1	1.000	-	-		FOG0011956
OrthoInspector	1	1.000	-	-		oto204510
Panther	1	1.100	-	-	LDO	PTHR22765
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X295
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	11	11.080