DRSC/TRiP Functional Genomics Resources

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Protein Alignment kremen1 and SLG1

DIOPT Version :9

Sequence 1:NP_001108389.1 Gene:kremen1 / 100141352 ZFINID:ZDB-GENE-070705-262 Length:465 Species:Danio rerio
Sequence 2:NP_014650.1 Gene:SLG1 / 854170 SGDID:S000005534 Length:378 Species:Saccharomyces cerevisiae


Alignment Length:313 Identity:63/313 - (20%)
Similarity:115/313 - (36%) Gaps:57/313 - (18%)


- Green bases have known domain annotations that are detailed below.


Zfish   115 LGCFKDSGDPTPLSGSH----QTSTKLTIQNCISFCRNQRYKLAGMESGYACFCGDDREYHRHGD 175
            :.||  |..|:..|.:.    |:|:     :|.|.|..:......:.:...|:|||...  ...:
Yeast    25 VNCF--SSLPSDFSKADSYNWQSSS-----HCNSECSAKGASYFALYNHSECYCGDTNP--SGSE 80

Zfish   176 APNTECNHVCFGDHTQPCGGDGRIIVF----DTKVGACGGNFTSPSAVIYSPDFPGKYRSGSVCY 236
            :.::.||..|||..::.|||:....|:    ||...:...:.:|..:...|        |.:...
Yeast    81 STSSSCNTYCFGYSSEMCGGEDAYSVYQLD
SDTNSNSISSSDSSTESTSAS--------SSTTSS 137

Zfish   237 WTIQVPGSSVILFNFTFFSIVDQKDMVELLDGKTNQVVARFDGRNPPRDIV---NITADFVILYF 298
            .|.....::....:.|..|:.....:..  ..::.|..|..........:.   ::|:|.:....
Yeast   138 TTSSTTSTTSSTTSSTTSSMASSSTVQN--SPESTQAAASISTSQSSSTVTSESSLTSDTLATSS 200

Zfish   299 YSDRTNEALGFSVVYHALRNPAFRPEEEDNGDEEDTST-MRPNSGSTT-TKSNTSQSGKSSHLYY 361
            .|.::.:|.  |::|    :..|..|........:|.| ...||||.| |..:.|.||..:|   
Yeast   201 TSSQSQDAT--SIIY----STTFHTEGGSTIFVTNTITASAQNSGSATGTAGSDSTSGSKTH--- 256

Zfish   362 VITSSPANMPGQWHGPGRTAGHNTMWTIYALAALLTLTVIAMVAKLLLHLTVK 414
               ...||:       |...|......:.|:|..|.:.:|      :.|:.:|
Yeast   257 ---KKKANV-------GAIVGGVVGGVVGAVAIALCILLI------VRHINMK 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kremen1NP_001108389.1 KR 26..109 CDD:238056
WSC 114..195 CDD:280068 20/83 (24%)
CUB 209..315 CDD:238001 14/108 (13%)
SLG1NP_014650.1 WSC 22..110 CDD:214616 23/93 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4157
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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