DRSC/TRiP Functional Genomics Resources

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Protein Alignment kremen1 and WSC3

DIOPT Version :9

Sequence 1:NP_001108389.1 Gene:kremen1 / 100141352 ZFINID:ZDB-GENE-070705-262 Length:465 Species:Danio rerio
Sequence 2:NP_014536.1 Gene:WSC3 / 854046 SGDID:S000005465 Length:556 Species:Saccharomyces cerevisiae


Alignment Length:347 Identity:68/347 - (19%)
Similarity:123/347 - (35%) Gaps:93/347 - (26%)


- Green bases have known domain annotations that are detailed below.


Zfish   116 GCFKDSGDPTPLSGSHQTSTKLTIQN-----CISFCRNQ--RYKLAGMESGYACFCGDDREYHRH 173
            ||:         |.:...|..|:::|     .:|:|:||  ...:..:.:|..|:||:...:...
Yeast    44 GCY---------SAADIQSAGLSLKNSYIYQSVSYCQNQCPESAVVALFNGSDCYCGNSVSFLTS 99

Zfish   174 -GDAPNTECNHVCFGDHTQPCGGDGRIIVF---DTKVGACGGNFTSP-SAVIYSPDFPGKYRSGS 233
             ..:.::.|...|.|...|.|||...:.|:   :|.|.:...:.:.. |:..|.|.......|..
Yeast   100 LTKSTDSNCGTKCSGWPYQMCGGSSYMNVYVNA
ETFVSSVESSSSKEGSSTSYMPSTTSSLSSAQ 164

Zfish   234 VCYWTIQVPGSSVILFNFTFFSIVDQKDMVELLDGKTNQVVARFDGRNPPRDIVNITADFVILYF 298
            :...|.:..                       .|.|:::::|         ..|:.|:.      
Yeast   165 ISSTTRRTS-----------------------TDMKSSEMIA---------TTVSTTST------ 191

Zfish   299 YSDRTNEALGFSVVYHALRNPAFRPEEEDNGDEEDTSTMRPNSGSTTTKSNTSQSGKSSHLYYVI 363
            .|..|:.....:.               .:.....||:...:|.|:||.|.||.:..|:      
Yeast   192 TSSSTSSTTSSTT---------------SSTTSSTTSSTTSSSTSSTTSSTTSSTTSST------ 235

Zfish   364 TSSPANMPGQWHGPGRTAGHNTMWTIYALAALLTLTVIAMVAKLLLHLTV----KSPSIPSISGS 424
            |||..:..........|:...:::::.:.::.:||:...       |.||    .|||...:..|
Yeast   236 TSSTTSSTTSSTTSSTTSSTTSIFSVTSSSSSITLSSSE-------HTTVDSRTSSPSSTLVPVS 293

Zfish   425 ESCAQSTTSEPWIILYRPSTIS 446
            .|  .||.|.|.:....|||.|
Yeast   294 SS--SSTLSTPKVTSMTPSTSS 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kremen1NP_001108389.1 KR 26..109 CDD:238056
WSC 114..195 CDD:280068 19/86 (22%)
CUB 209..315 CDD:238001 12/106 (11%)
WSC3NP_014536.1 WSC 39..132 CDD:214616 22/96 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4157
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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