DRSC/TRiP Functional Genomics Resources

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Protein Alignment kremen1 and mura

DIOPT Version :9

Sequence 1:NP_001108389.1 Gene:kremen1 / 100141352 ZFINID:ZDB-GENE-070705-262 Length:465 Species:Danio rerio
Sequence 2:NP_731367.2 Gene:mura / 41145 FlyBaseID:FBgn0037705 Length:1173 Species:Drosophila melanogaster


Alignment Length:466 Identity:75/466 - (16%)
Similarity:122/466 - (26%) Gaps:143/466 - (30%)


- Green bases have known domain annotations that are detailed below.


Zfish    28 YTANGEDYRGRQNQTSLQGGRPCLFWNETFERPYNTNKYPNGEGGLGQHNFCRNPDGDV----RP 88
            :|.|....|.::......||| .::...|........:....:...||.....|.:.::    .|
  Fly    20 FTRNSSSVRSQRGGGGGLGGR-MVYSPHTHPHVQQQQQQQQQQQQQGQQRSSNNGNNNLWLGNSP 83

Zfish    89 WCYIADLEDGSYWKYCDIPTCQMPGNLGCFKDSGDPTPLSGSHQTSTKLTIQNCISFCRNQRYKL 153
            ||.: :|..               ||.|...::|.....:.....|:.....|..:...|....:
  Fly    84 WCNV-NLNG---------------GNSGNNNNNGGNNNNNNGGNISSNNNSNNVNNKDANPNCDV 132

Zfish   154 AGMESGYACFCGDDREYHRHGDAPNT-------ECNHVCFGDHTQPCGGDGRIIVFDTKVGA--- 208
            ....|...|...:.:.:|.|.::.|.       ..||.....|..|         ..|::..   
  Fly   133 QTSNSSGTCIYNNSKAHHHHNNSNNNGHTQSHIHTNHSLHQGHHHP---------HHTQMHTPHY 188

Zfish   209 -------CGGNFTSPSAVIYSPDFP---------------------------------------- 226
                   ...::.......|||:.|                                        
  Fly   189 PHSSSPQQSNSYRQYPPHSYSPNSPHSNGHTNSNASNNPISQRSNPQAHPNQNQNSNFYEMCTGS 253

Zfish   227 -GKYRSGSVCYWTIQV--------------PGSSVILFNFTFFSIVDQKDMVELLDGKTNQVVAR 276
             |.:..||:....:::              |...|:.|.....|..:........|...:....|
  Fly   254 GGSHTYGSMSVSLVRLNPARLCLTLGPVTPPAQRVVSFGHRSHSHSNSSSNTSSSDQNQHNPPPR 318

Zfish   277 FDGRNPPRDIVNITADFVILYFYSDRTNEALGFSVVYHALRNPAFR------PEEEDNGDEEDTS 335
            ....:|..........:...|.|.......      ||.|.:|..:      |....|.:..:.:
  Fly   319 SQNHHPNPHHSQYQYQYQYQYRYQYHPPHQ------YHPLHSPQQQTNRQSLPLTRTNSNSINAT 377

Zfish   336 TMRPNSGSTTTKSN--------------------TSQSGKS---SHLYYVI--TSSPANMPGQWH 375
            |.  ||.:.||.||                    ||.|..|   ....:.|  .|:|.|...|..
  Fly   378 TF--NSTNPTTNSNPTDVVNVNSCTDIIPYGSSSTSSSASSMLPQQQQHQINNASAPINSHSQGQ 440

Zfish   376 GPGRT--AGHN 384
            |||.:  .|||
  Fly   441 GPGNSPNLGHN 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kremen1NP_001108389.1 KR 26..109 CDD:238056 14/84 (17%)
WSC 114..195 CDD:280068 15/87 (17%)
CUB 209..315 CDD:238001 17/160 (11%)
muraNP_731367.2 zf-RING_2 1076..1118 CDD:290367
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R768
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.940

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