DRSC/TRiP Functional Genomics Resources

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Protein Alignment kremen1 and Znrf3

DIOPT Version :9

Sequence 1:NP_001108389.1 Gene:kremen1 / 100141352 ZFINID:ZDB-GENE-070705-262 Length:465 Species:Danio rerio
Sequence 2:NP_001074393.1 Gene:Znrf3 / 407821 MGIID:3039616 Length:913 Species:Mus musculus


Alignment Length:139 Identity:34/139 - (24%)
Similarity:40/139 - (28%) Gaps:57/139 - (41%)


- Green bases have known domain annotations that are detailed below.


Zfish    26 ECYTANGEDYRGRQNQTSLQG------------------GRPCLFWNETFERPYNTNKYPNGEGG 72
            :|...:||...|     |.||                  |.||.|:.|         |......|
Mouse   723 DCNPPSGEPQLG-----SSQGLYGLHSDHYPRTDGVKYEGLPCCFYEE---------KQVAHSAG 773

Zfish    73 LGQHNFCRNPDGDVR----------PWCYIA--DLEDGSYWKYCDIPTCQMPGNLGCFKDSGDPT 125
            .|  |.|...|..|.          |.||..  ||..       .||.  :|.::.|  |.|.|.
Mouse   774 RG--NGCYTEDYSVSVQYTLTEEPPPSCYAGPRDLSQ-------RIPI--IPEDVDC--DLGLPQ 825

Zfish   126 PLSGSHQTS 134
            ...|.|..|
Mouse   826 DCHGMHNHS 834

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kremen1NP_001108389.1 KR 26..109 CDD:238056 26/112 (23%)
WSC 114..195 CDD:280068 7/21 (33%)
CUB 209..315 CDD:238001
Znrf3NP_001074393.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..32
zf-RING_2 289..331 CDD:290367
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 601..669
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 855..913
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 491 1.000 Domainoid score I2847
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 997 1.000 Inparanoid score I2299
OMA 1 1.010 - - QHG40703
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0013402
OrthoInspector 1 1.000 - - oto56871
orthoMCL 1 0.900 - - OOG6_113589
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R768
SonicParanoid 1 1.000 - - X4852
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
109.900

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