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Protein Alignment kremen1 and meu34
DIOPT Version :9
| Sequence 1: | NP_001108389.1 |
Gene: | kremen1 / 100141352 |
ZFINID: | ZDB-GENE-070705-262 |
Length: | 465 |
Species: | Danio rerio |
| Sequence 2: | NP_593329.1 |
Gene: | meu34 / 2543036 |
PomBaseID: | SPAC3A12.03c |
Length: | 309 |
Species: | Schizosaccharomyces pombe |
| Alignment Length: | 174 |
Identity: | 36/174 - (20%) |
| Similarity: | 49/174 - (28%) |
Gaps: | 82/174 - (47%) |
- Green bases have known domain annotations that are detailed below.
|
Zfish 245 SVILFNFTFFSIV----------------DQKDMVELLDGKTNQVVARFDGRNPPRDIVNITADF 293
|||..||.||.:. |::.::: :.:|.|..|...|.
pombe 33 SVIFINFFFFYLCRCCVYFYHTLENQEGDDERPLIQ------HHMVNRSTGSLSPS--------- 82
Zfish 294 VILYFYSDRTNEALGF--------SVVY----------------------HALRNPAFRPEEEDN 328
.||....||: |||. ||.....|.....:|
pombe 83 ------VDRLGNVLGYDIPSRRRRSVVSKEALSCISLEIPYIKWLKKRKGHAKGESTFLDNRSEN 141
Zfish 329 ------GDEEDTSTM------RPNSGSTTTKSNTSQSGKSSHLY 360
|..|..|.: |||.||| |....|...|::|
pombe 142 QSVIVQGQGETPSVIITYDVRRPNLGST---SFVEMSSALSNIY 182
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| kremen1 | NP_001108389.1 |
KR |
26..109 |
CDD:238056 |
|
| WSC |
114..195 |
CDD:280068 |
|
| CUB |
209..315 |
CDD:238001 |
19/115 (17%) |
| meu34 | NP_593329.1 |
RING |
205..249 |
CDD:238093 |
|
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
| Tool |
Simple Score |
Weighted Score |
Original Tool Information |
| BLAST Result |
Score |
Score Type |
Cluster ID |
| Domainoid |
1 |
1.000 |
60 |
1.000 |
Domainoid score |
I3413 |
| eggNOG |
0 | 0.000 |
Not matched by this tool. |
| Hieranoid |
0 | 0.000 |
Not matched by this tool. |
| Homologene |
0 | 0.000 |
Not matched by this tool. |
| Inparanoid |
0 | 0.000 |
Not matched by this tool. |
| OMA |
0 | 0.000 |
Not matched by this tool. |
| OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
| OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
| orthoMCL |
0 | 0.000 |
Not matched by this tool. |
| Panther |
0 | 0.000 |
Not matched by this tool. |
| Phylome |
0 | 0.000 |
Not matched by this tool. |
| RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R768 |
| SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
| SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
| TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 2.030 |
|
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