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Protein Alignment kremen1 and plr-1
DIOPT Version :10
| Sequence 1: | NP_001108389.1 |
Gene: | kremen1 / 100141352 |
ZFINID: | ZDB-GENE-070705-262 |
Length: | 465 |
Species: | Danio rerio |
| Sequence 2: | NP_499473.2 |
Gene: | plr-1 / 176575 |
WormBaseID: | WBGene00023404 |
Length: | 487 |
Species: | Caenorhabditis elegans |
| Alignment Length: | 65 |
Identity: | 17/65 - (26%) |
| Similarity: | 32/65 - (49%) |
Gaps: | 10/65 - (15%) |
- Green bases have known domain annotations that are detailed below.
|
Zfish 309 FSVVYHALRNPAFRPEEEDNGDEEDTSTMRPNSGSTTTKSNTSQSGKSSHL-------YYVITSS 366
|.|||. ..|.....|:.:|..:||:::.|.: |.:....::.|.:|:.| :::|.||
Worm 359 FDVVYK--HYPKVDSPEKLSGRSDDTTSLLPRT-SPSEDLPSAPSSRSTRLTRPYRTTHHLIPSS 420
Zfish 367 366
Worm 421 420
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| kremen1 | NP_001108389.1 |
KR |
26..109 |
CDD:238056 |
|
| WSC |
114..195 |
CDD:460348 |
|
| CUB |
209..315 |
CDD:238001 |
4/5 (80%) |
Software error:
Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.
For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message
and the time and date of the error.