DRSC/TRiP Functional Genomics Resources

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Protein Alignment HDAC6 and HDAC1

DIOPT Version :10

Sequence 1:XP_047297659.1 Gene:HDAC6 / 10013 HGNCID:14064 Length:1261 Species:Homo sapiens
Sequence 2:NP_647918.2 Gene:HDAC1 / 38565 FlyBaseID:FBgn0015805 Length:521 Species:Drosophila melanogaster


Alignment Length:63 Identity:16/63 - (25%)
Similarity:28/63 - (44%) Gaps:18/63 - (28%)


- Green bases have known domain annotations that are detailed below.


Human    70 SEVYQLGDVSQKTTWHRISVFRPGLRDVAYQYVKK---GSRIYLEGKI-------DYGEYMDK 122
            |.:|     :.|..|..::..|.|:|:   :.|||   .|.|..:||:       :...|:|:
  Fly   555 SSIY-----ASKGKWDSVAQLRRGMRE---KNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQ 609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HDAC6XP_047297659.1 HDAC6-dom1 145..481 CDD:212545
HDAC6-dom2 531..881 CDD:212527
zf-UBP 1179..1241 CDD:460464
HDAC1NP_647918.2 Arginase_HDAC 5..372 CDD:450134
Blue background indicates that the domain is not in the aligned region.

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