DRSC/TRiP Functional Genomics Resources

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Protein Alignment HDAC6 and HDAC11

DIOPT Version :10

Sequence 1:XP_047297659.1 Gene:HDAC6 / 10013 HGNCID:14064 Length:1261 Species:Homo sapiens
Sequence 2:NP_733048.1 Gene:HDAC11 / 326120 FlyBaseID:FBgn0051119 Length:343 Species:Drosophila melanogaster


Alignment Length:321 Identity:85/321 - (26%)
Similarity:139/321 - (43%) Gaps:56/321 - (17%)


- Green bases have known domain annotations that are detailed below.


Human   154 GPERLH---AIKEQLIQEGLLDRCVSFQ---ARFAE-----KEELMLVHSLEYIDLMETTQYMNE 207
            |.||||   |.|.:.|.:.|   |...|   ..|.|     |::|..:|:.||:..:..:  ||.
  Fly    46 GLERLHPFDAAKGKHIHKLL---CAQLQLDDGSFYEPTELTKDQLRRIHTREYLKSLRWS--MNV 105

Human   208 ---GELRVLA---DTY-DSVYLHPNSYSCACLASGSVL--RLVDAVLGAEIRNGMAIIRPPG-HH 262
               .|:.::|   :.| ...||.|..:.    |:||:|  :|.       :..|.||....| ||
  Fly   106 ACIAEVPLMAFVPNRYIQRSYLRPMRFQ----AAGSILAGKLA-------LDYGWAINLGGGFHH 159

Human   263 AQHSLMDGYCMFNHVA--VAARYAQQKHRIRRVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHRYE 325
            .......|:|.:..::  :...:.|:..|:||::|||.|.|.|.|.:..|:...:|..|.::   
  Fly   160 CCSYRGGGFCPYADISLLIVRLFEQEPFRVRRIMIVDLDAHQGNGHERDFNNVAAVYIFDMY--- 221

Human   326 QGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIAAFLHVLLPVALEFQPQLVLVAAG 390
            ....:|....:..|.....:.:.||          .|..|:......|:....||:|.:|:..||
  Fly   222 NAFVYPRDHVAKESIRCAVELRNYT----------EDGFYLRQLKRCLMQSLAEFRPDMVVYNAG 276

Human   391 FDALQGDPKGEMAATPAGFAQLTHLLMG---LAGGKLILSLEGGYNLRALAEGVSASLHTL 448
            .|.|:|||.|.:|.:..|..:...|:..   ..|..:::.|.||| |:|.|..::.|:..|
  Fly   277 TDVLEGDPLGNLAISAEGVIERDRLVFSTFRALGIPVVMLLSGGY-LKASAGVITDSIVNL 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HDAC6XP_047297659.1 HDAC6-dom1 145..481 CDD:212545 85/321 (26%)
HDAC6-dom2 531..881 CDD:212527
zf-UBP 1179..1241 CDD:460464
HDAC11NP_733048.1 HDAC_classIV 51..336 CDD:212519 80/314 (25%)
Blue background indicates that the domain is not in the aligned region.

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