Protein Alignment rnf145l and hrd1

DIOPT Version :9

• Sequence 1: NP_001106467.1
• Gene: rnf145l / 100127651
• XenbaseID: XB-GENE-5921670
• Length: 679
• Species: Xenopus tropicalis
• Sequence 2: NP_596376.1
• Gene: hrd1 / 2539900
• PomBaseID: SPBC17D11.02c
• Length: 677
• Species: Schizosaccharomyces pombe
• Alignment Length: 359
• Identity: 81/359 - (22%)
• Similarity: 135/359 - (37%)
• Gaps: 111/359 - (30%)

 Frog   280 YLALGMLNFCKFYLLGFDAFRNGNVMHRGVTEGVTLMLLALQTGLLDLQVLQRTFLLSIILFIVV 344
            ::.:| ||.|   |..|.|..|..         .||:..:|||  .:|::|...|.:::...::.
pombe    41 HITIG-LNVC---LCLFFAIANAL---------KTLLFGSLQT--FELELLYEQFWITLTEIMLA 90

 Frog   345 TSTLQSMIEIADPIVLALGATRNRSLWKHLRGVSMCLFLLVFPCFMAYK--------ISQFFHMD 401
            .:..:..|.|:..::|                 |..:|..||....:::        ..|.||:.
pombe    91 ITVFREAISISFFMLL-----------------STLMFARVFHSICSFRTERLQIQLTDQRFHIF 138

 Frog   402 FWLLILVSSCMLTSLQVLGTLFIYALFMVELFHDS-------------------QVEKIDEIIYY 447
            ..|     :|....|.:|....||..|..|...|.                   :..|:...:|.
pombe   139 SRL-----TCAYFVLSILDASLIYLCFTSEHLGDKSTRMLFVCEFSVLLLNLTIEASKLCIYLYE 198

 Frog   448 VNAVSRVLE------FLVAVC-----VVAYGTWESLFGEWSWMGVSVIIVH------SYFNVWLR 495
            ...:.:|.:      |.:.||     ::||    ||...:.:..|||.|..      .:::::.|
pombe   199 ARHLDQVWDEKSTYLFRLEVCRDGLRLLAY----SLLFMYQFPYVSVPIYSIRQMYTCFYSLFRR 259

 Frog   496 AQSGWKSFLLRREAAKKISSL-PMATLEQLRAHNDVCPICFQDM-----------------SGAV 542
            .:...:.    |:|.:.:::: |.||.|||...:..|.||.::|                 .|..
pombe   260 IREHARF----RQATRDMNAMYPTATEEQLTNSDRTCTICREEMFHPDHPPENTDEMEPLPRGLD 320

 Frog   543 IT----PCSHIFHGECLRKWLYVQDTCPICHQQV 572
            :|    ||.||.|..|||.||..|.|||||.:.|
pombe   321 MTPKRLPCGHILHFHCLRNWLERQQTCPICRRSV 354

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rnf145l	NP_001106467.1	TRC8_N	5..500	CDD:290425	50/263 (19%)
		zf-rbx1	<528..569	CDD:289448	21/61 (34%)
		zf-RING_2	529..569	CDD:290367	21/60 (35%)
hrd1	NP_596376.1	HRD1	1..514	CDD:227568	81/359 (23%)
		zf-RING_2	291..351	CDD:290367	21/59 (36%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910