DRSC/TRiP Functional Genomics Resources

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Protein Alignment rnf145l and RNF145

DIOPT Version :9

Sequence 1:NP_001106467.1 Gene:rnf145l / 100127651 XenbaseID:XB-GENE-5921670 Length:679 Species:Xenopus tropicalis
Sequence 2:NP_001186309.1 Gene:RNF145 / 153830 HGNCID:20853 Length:693 Species:Homo sapiens


Alignment Length:660 Identity:352/660 - (53%)
Similarity:461/660 - (69%) Gaps:18/660 - (2%)


- Green bases have known domain annotations that are detailed below.


 Frog     3 RLEEIANVVLRLPSVVVLDLLYRWDFQA-FTELSRPTYETN-FFKSKYL-WNIYYLAHVLCAVLL 64
            :||.:.||.||:||:::||:|||||..: |.::.|.:...| .|:.||| .|::|:.::|..|||
Human    36 KLEAVLNVALRVPSIMLLDVLYRWDVSSFFQQIQRSSLSNNPLFQYKYLALNMHYVGYILSVVLL 100

 Frog    65 LLPLRYLVSIYLYLLTALLLYVGHQTTRDYIHQEMDSDFPGALFEDQGALSRIITALTGLVIVGT 129
            .||.::||.:|||.|||||||.|||.:|||:..|::..:.|.::.:..:::|..|||.|.::|.|
Human   101 TLPRQHLVQLYLYFLTALLLYAGHQISRDYVRSELEFAYEGPMYLEPLSMNRFTTALIGQLVVCT 165

 Frog   130 LCSLLMKTRHAWLFCSPVLPLLGRIVGLPLQALPPLNNFSIFLTVLGSLFYVLSNLGVLLILFRK 194
            |||.:|||:..|||.:.:||||.|:..:||:.:..:|.|::..|.|..|:::.|||.|...|.:.
Human   166 LCSCVMKTKQIWLFSAHMLPLLARLCLVPLETIVIINKFAMIFTGLEVLYFLGSNLLVPYNLAKS 230

 Frog   195 VYQEIVQVQELDRVVALVMQLWTHLAVPLLFLVFWLVSFSFHIVSFLSSKPGALGQQGLIFIFLN 259
            .|:|:|||.|:..::||.|.||..|.||:||:|||||.|:..|.|:.|::.....::.|:|:||.
Human   231 AYRELVQVVEVYGLLALGMSLWNQLVVPVLFMVFWLVLFALQIYSYFSTRDQPASRERLLFLFLT 295

 Frog   260 SAAECCGTPYCLIGLTFTVSYLALGMLNFCKFYLLGFDAFRNGNVMHRGVTEGVTLMLLALQTGL 324
            |.||||.|||.|:||.||||::|||:|..|||||.|:.||.|...|:||:||||||::||:||||
Human   296 SIAECCSTPYSLLGLVFTVSFVALGVLTLCKFYLQGYRAFMNDPAMNRGMTEGVTLLILAVQTGL 360

 Frog   325 LDLQVLQRTFLLSIILFIVVTSTLQSMIEIADPIVLALGATRNRSLWKHLRGVSMCLFLLVFPCF 389
            ::|||:.|.|||||||||||.|.||||:||||||||||||:|::|||||.|.||:||||||||.:
Human   361 IELQVVHRAFLLSIILFIVVASILQSMLEIADPIVLALGASRDKSLWKHFRAVSLCLFLLVFPAY 425

 Frog   390 MAYKISQFFHMDFWLLILVSSCMLTSLQVLGTLFIYALFMVELFHDSQVEKIDEIIYYVNAVSRV 454
            |||.|.|||||||||||::||.:|||||||||||||.|||||.|....||.:|::|||||...|:
Human   426 MAYMICQFFHMDFWLLIIISSSILTSLQVLGTLFIYVLFMVEEFRKEPVENMDDVIYYVNGTYRL 490

 Frog   455 LEFLVAVCVVAYGTWESLFGEWSWMGVSVIIVHSYFNVWLRAQSGWKSFLLRREAAKKISSLPMA 519
            ||||||:||||||..|::||||:.||..:|.:|||:|||||||.|||||||||:|..||.|||:|
Human   491 LEFLVALCVVAYGVSETIFGEWTVMGSMIIFIHSYYNVWLRAQLGWKSFLLRRDAVNKIKSLPIA 555

 Frog   520 TLEQLRAHNDVCPICFQDMSGAVITPCSHIFHGECLRKWLYVQDTCPICHQQVKPLAETLREGEE 584
            |.|||..|||:|.||:|||..||||||||.||..||:||||||:|||:||..:|..::....|.|
Human   556 TKEQLEKHNDICAICYQDMKSAVITPCSHFFHAGCLKKWLYVQETCPLCHCHLKNSSQLPGLGTE 620

 Frog   585 -----KSEEEEEVEADEEVRAEVTAH--GFRRNQCNPERGREEMELGEDRRDQTNGG----ERRC 638
                 .:..|:.|...|........|  |.|..    |..|:..|....|.|...|.    |...
Human   621 PVLQPHAGAEQNVMFQEGTEPPGQEHTPGTRIQ----EGSRDNNEYIARRPDNQEGAFDPKEYPH 681

 Frog   639 DAKHEREEVE 648
            .||.|...||
Human   682 SAKDEAHPVE 691

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rnf145lNP_001106467.1 TRC8_N 5..500 CDD:290425 278/497 (56%)
zf-rbx1 <528..569 CDD:289448 29/40 (73%)
zf-RING_2 529..569 CDD:290367 28/39 (72%)
RNF145NP_001186309.1 TRC8_N 38..536 CDD:290425 278/497 (56%)
zf-rbx1 <564..605 CDD:289448 29/40 (73%)
zf-RING_2 565..605 CDD:290367 28/39 (72%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
NCBI 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG46488
OrthoDB 1 1.010 - - D119734at7742
OrthoFinder 1 1.000 - - FOG0006288
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4575
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.930

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