DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ptprdb and Ptp36E

DIOPT Version :9

Sequence 1:XP_021330723.1 Gene:ptprdb / 100073332 ZFINID:ZDB-GENE-070615-38 Length:1955 Species:Danio rerio
Sequence 2:NP_001286033.1 Gene:Ptp36E / 35091 FlyBaseID:FBgn0267486 Length:682 Species:Drosophila melanogaster


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ptprdbXP_021330723.1 I-set 32..123 CDD:254352
Ig2_RPTP_IIa_LAR_like 151..233 CDD:319301
Ig3_RPTP_IIa_LAR_like 257..325 CDD:143216
FN3 330..419 CDD:238020
FN3 426..517 CDD:238020
FN3 523..613 CDD:238020
fn3 620..707 CDD:306538
FN3 722..827 CDD:238020
FN3 829..920 CDD:238020
FN3 957..1043 CDD:238020
PTPc 1417..1654 CDD:238006
PTPc 1686..1945 CDD:214550
Ptp36ENP_001286033.1 Y_phosphatase 125..368 CDD:395053
Y_phosphatase 428..671 CDD:395053
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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