DRSC/TRiP Functional Genomics Resources

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Protein Alignment SIGLEC14 and wrk-1

DIOPT Version :9

Sequence 1:NP_001092082.1 Gene:SIGLEC14 / 100049587 HGNCID:32926 Length:396 Species:Homo sapiens
Sequence 2:NP_001024651.1 Gene:wrk-1 / 181093 WormBaseID:WBGene00006942 Length:452 Species:Caenorhabditis elegans


Alignment Length:375 Identity:72/375 - (19%)
Similarity:124/375 - (33%) Gaps:115/375 - (30%)


- Green bases have known domain annotations that are detailed below.


Human     2 LPLLLLPLL----------WGGSLQEKPVYELQVQKSVTVQEGLCVLVPCSFSYPWRSWYSSPPL 56
            |.||:|.||          .||:|..|              ||..:.:.|.        ...|.:
 Worm     4 LVLLILGLLIASTSAQIRTKGGTLIAK--------------EGESLTLRCE--------VEDPSV 46

Human    57 YVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCSLSIGDARMEDTGSYFF--R 119
            .:.|.::      .||||.::...    :|.|.:.:                .||.:.|...  |
 Worm    47 AIIWRKN------TEVVAVDDEIL----DTYGGYEI----------------SMEGSTSVLTIKR 85

Human   120 VERGRDVKYSYQQNKLNLEVTALIE----KPDIHFLEPLESGRPTR-------------LSCSLP 167
            ||......||....:..:.||.:|:    ||....::||....|..             ::|.:.
 Worm    86 VEPINSANYSCALAEPEVSVTFVIKVQVFKPTQVSVKPLVVISPDTGVYHARVGEKNLVITCHVK 150

Human   168 GSCEAGPPLTFSWTGNALSPLDPETTR---SSELTLTPRPEDHGTNLTCQVKRQGAQVTTERTVQ 229
               |..|.....||..| :.|..:..|   .:.:.:|...:.|.....|..:....  :...|:.
 Worm   151 ---EGNPKPGVVWTKQA-AKLPEDIKREHGGARIVITEVKKHHAGKYNCLAENIAG--SDRATID 209

Human   230 LNVSYAPQNLAISIFFRNGTGTALR---ILSNGMSVPIQEGQSLFLACTVDSNPPASLSWFREGK 291
            ::|:...|            |....   :.:....:|:::.|:....||.|..|...:.|...|.
 Worm   210 IHVAEPLQ------------GEREEKPWVKNEDTFIPVRKNQNASFWCTYDGTPVPQVEWLFNGY 262

Human   292 ALN--------PSQTSM------SGTLELPNIGAREGGEFTCRVQHPLGS 327
            .:|        .|:|:.      ..||.:.:|.....|::.||:.:.|||
 Worm   263 KINFNDEKFKKTSETAQRLNGYSKSTLTVGDISEEAFGDYACRISNKLGS 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SIGLEC14NP_001092082.1 Ig_Siglec_N 21..140 CDD:143189 19/120 (16%)
IG_like 26..139 CDD:214653 19/114 (17%)
Ig 150..216 CDD:299845 14/81 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 190..209 3/21 (14%)
Ig 252..335 CDD:299845 20/93 (22%)
IG_like 261..336 CDD:214653 20/81 (25%)
wrk-1NP_001024651.1 IG_like 25..113 CDD:214653 25/135 (19%)
IGc2 31..96 CDD:197706 18/98 (18%)
IG_like 132..212 CDD:214653 12/85 (14%)
IGc2 142..202 CDD:197706 11/63 (17%)
IG_like 235..320 CDD:214653 19/78 (24%)
Ig 245..318 CDD:143165 18/68 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X34
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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