DRSC/TRiP Functional Genomics Resources

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Protein Alignment gng3 and Ggamma30A

DIOPT Version :9

Sequence 1:NP_001165080.1 Gene:gng3 / 100038286 XenbaseID:XB-GENE-968597 Length:75 Species:Xenopus tropicalis
Sequence 2:NP_001285776.1 Gene:Ggamma30A / 45234 FlyBaseID:FBgn0267252 Length:238 Species:Drosophila melanogaster


Alignment Length:52 Identity:18/52 - (34%)
Similarity:31/52 - (59%) Gaps:0/52 - (0%)


- Green bases have known domain annotations that are detailed below.


 Frog    17 RKMVEQLKIEASMCRIKVSKAASDLMTFCDAHACEDPLITPVPTSENPFREK 68
            :|.:|.:|.:|||.|..:||:.:::.:|.:.:...||||.......||:.||
  Fly    15 KKQIENMKYQASMERWPLSKSIAEMRSFIEENEKNDPLINAPDKKNNPWAEK 66

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gng3NP_001165080.1 GGL 13..75 CDD:128520 18/52 (35%)
Ggamma30ANP_001285776.1 GGL 11..67 CDD:238024 18/52 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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