Sequence 1: | XP_012809196.1 | Gene: | fus / 100038234 | XenbaseID: | XB-GENE-495119 | Length: | 554 | Species: | Xenopus tropicalis |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_523365.2 | Gene: | caz / 32587 | FlyBaseID: | FBgn0285954 | Length: | 399 | Species: | Drosophila melanogaster |
Alignment Length: | 462 | Identity: | 183/462 - (39%) |
---|---|---|---|
Similarity: | 226/462 - (48%) | Gaps: | 119/462 - (25%) |
- Green bases have known domain annotations that are detailed below.
Frog 148 QQSSYGGQQQSSYGSQQGQSGYGSQQPSSYGQQQQSSYSQPQGYGQQQTQYSGGVPDVYDLFPAG 212
Frog 213 GYNQDSPSMGSGSYGGGSDQGGYGGQDRGRGRGGFGGRGGGGGGGAGGFDSRGRGSRG------- 270
Frog 271 ----GRGGMGGGERGGFSKFGGPREGGGPPRHEMAEQDNSDNNTIFVQGLGENVTVESVADYFKQ 331
Frog 332 IGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAIDWFDGKEFSGNPIKVSFATRR 396
Frog 397 ADFNSRGGGNGRGRGRG--GGPMGRGGFGGPPGGSGSR------GGSGGYPSGGGG--------- 444
Frog 445 QQRAGDWKCPNPSCENMNFSWRNECNQCKAPKPEGPGGPGGSHMGGDVIAGGFGDERRGGRGGFD 509
Frog 510 RGGFRGRGG------DRGG-----------------FRGGRGGDRGGFGPGKMDSR--GDHRQD- 548
Frog 549 -RRDRPY 554 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
fus | XP_012809196.1 | RRM | <298..>398 | CDD:223796 | 47/99 (47%) |
RRM_FUS_TAF15 | 307..392 | CDD:240979 | 42/84 (50%) | ||
zf-RanBP | 447..474 | CDD:279035 | 18/26 (69%) | ||
caz | NP_523365.2 | RRM | <118..>205 | CDD:223796 | 44/90 (49%) |
RRM_SARFH | 122..204 | CDD:240978 | 42/81 (52%) | ||
zf-RanBP | 275..304 | CDD:279035 | 21/30 (70%) | ||
RanBP2-type Zn finger | 279..298 | CDD:275375 | 14/20 (70%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 90 | 1.000 | Domainoid score | I7662 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 268 | 1.000 | Inparanoid score | I2958 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1539664at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002238 | |
OrthoInspector | 1 | 1.000 | - | - | otm48325 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R4499 |
SonicParanoid | 1 | 1.000 | - | - | X712 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
7 | 7.090 |