DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hsp70 and Hsc70-4

DIOPT Version :9

Sequence 1:NP_001106370.1 Gene:hsp70 / 100037899 XenbaseID:XB-GENE-485626 Length:643 Species:Xenopus tropicalis
Sequence 2:NP_001262586.1 Gene:Hsc70-4 / 41840 FlyBaseID:FBgn0266599 Length:651 Species:Drosophila melanogaster


Alignment Length:650 Identity:526/650 - (80%)
Similarity:582/650 - (89%) Gaps:9/650 - (1%)


- Green bases have known domain annotations that are detailed below.


 Frog     3 SKGVAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNT 67
            ||..||||||||||||||||||||||||||||||||||||||||||||||||||||||||||..|
  Fly     2 SKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTQT 66

 Frog    68 VFDAKRLIGRKFNDPVVQSDLKHWPFQVVSDHGKPKVKVEFKGEEKTFFPEEISSMVLIKMKETA 132
            :|||||||||||:|..||||:|||||:|||..||||::|.:|.|:|||||||||||||.||||||
  Fly    67 IFDAKRLIGRKFDDAAVQSDMKHWPFEVVSADGKPKIEVTYKDEKKTFFPEEISSMVLTKMKETA 131

 Frog   133 EAYLGHAVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGLDKGTRGERNVL 197
            |||||..||||||||||||||||||||||||.||||||||||||||||||||||||...||||||
  Fly   132 EAYLGKTVTNAVITVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKAVGERNVL 196

 Frog   198 IFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRMVNHFMEEFKRKHKKDISQNKRALR 262
            ||||||||||||||:|||||||||:|||||||||||||||:|.||::|||||||||::.||||||
  Fly   197 IFDLGGGTFDVSILSIDDGIFEVKSTAGDTHLGGEDFDNRLVTHFVQEFKRKHKKDLTTNKRALR 261

 Frog   263 RLRTACERAKRTLSSSSQASIEIDSLFEGIDFYTSITRARFEELCSDLFRGTLEPVEKALRDAKL 327
            ||||||||||||||||:||||||||||||.||||||||||||||.:||||.|::|||||||||||
  Fly   262 RLRTACERAKRTLSSSTQASIEIDSLFEGTDFYTSITRARFEELNADLFRSTMDPVEKALRDAKL 326

 Frog   328 DKSQIDEIVLVGGSTRIPKVQKLLQDFFNGRELNKSINPDEAVAYGAAVQAAILMGDKSENVQDL 392
            |||.|.:||||||||||||||:||||.|||:|||||||||||||||||||||||.||||:.||||
  Fly   327 DKSVIHDIVLVGGSTRIPKVQRLLQDLFNGKELNKSINPDEAVAYGAAVQAAILHGDKSQEVQDL 391

 Frog   393 LLLDVAPLSLGLETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVFEGERAMTKDNNLL 457
            |||||.|||||:|||||||:|||||||||||||||||||||||||||||||:|||||||||||||
  Fly   392 LLLDVTPLSLGIETAGGVMSVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLL 456

 Frog   458 GKFELSGIPPAPRGVPQIEVTFDIDANGILNVSAVEKSSGKQNKITITNDKGRLSKEDIEKMVQE 522
            ||||||||||||||||||||||||||||||||:|:|:|:.|:||||||||||||||||||:||.|
  Fly   457 GKFELSGIPPAPRGVPQIEVTFDIDANGILNVTALERSTNKENKITITNDKGRLSKEDIERMVNE 521

 Frog   523 AERYKADDDAQREKIDAKNSLESYAFNLKSMVEDENMKGKISEGDKRIISEKCTQIISWLENNQL 587
            ||:|:.:|:.|:|.|.|||.||||.||:|:.::::|:|.|||:.|:..|.:||.:.|.||:.|||
  Fly   522 AEKYRNEDEKQKETIAAKNGLESYCFNMKATLDEDNLKTKISDSDRTTILDKCNETIKWLDANQL 586

 Frog   588 AEKDEYAFQQKELERVCQPIITKLYQGS---------MPGSMPGSSCGAQARQGGSSGPTIEEVD 643
            |:|:||..:|||||.||.|||||||||:         .||.|||::..|.|...|.:||||||||
  Fly   587 ADKEEYEHRQKELEGVCNPIITKLYQGAGFPPGGMPGGPGGMPGAAGAAGAAGAGGAGPTIEEVD 651

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hsp70NP_001106370.1 PTZ00009 2..643 CDD:240227 524/648 (81%)
HSPA1-2_6-8-like_NBD 7..382 CDD:212675 329/374 (88%)
Hsc70-4NP_001262586.1 PTZ00009 1..612 CDD:240227 507/609 (83%)
HSPA1-2_6-8-like_NBD 6..381 CDD:212675 329/374 (88%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D180577at33208
OrthoFinder 1 1.000 - - FOG0000049
OrthoInspector 1 1.000 - - otm48923
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R573
SonicParanoid 1 1.000 - - X148
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.040

Return to query results.
Submit another query.