DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pak4 and Pak

DIOPT Version :9

Sequence 1:XP_012823244.1 Gene:pak4 / 100036644 XenbaseID:XB-GENE-1013749 Length:665 Species:Xenopus tropicalis
Sequence 2:NP_001138013.2 Gene:Pak / 44039 FlyBaseID:FBgn0267698 Length:840 Species:Drosophila melanogaster


Alignment Length:807 Identity:253/807 - (31%)
Similarity:358/807 - (44%) Gaps:202/807 - (25%)


- Green bases have known domain annotations that are detailed below.


 Frog    19 KKKKRIE----------------ISAPLNFEHRVHTGFDQQEQKFTGLPRQWQSLI-------EE 60
            :|||.::                ||.|.||||.||.|||....:|||:|..|..|:       :|
  Fly    60 RKKKTLKSKIKGSKPSHTDSKPNISYPTNFEHTVHVGFDAVTGEFTGMPEAWARLLMNSNISKQE 124

 Frog    61 SAKRPKPLVD--PSYITTINHVPQKTIVRGSKMSLDGSLAWLLDEFDAMSICRSNSLRRESPPCH 123
            ..|.|:.::|  ..:..|....|....:..:..:..||           |:.|.:|   .||...
  Fly   125 QKKNPQAVLDVLKWFDNTTKQRPSSKYMTNAITTHSGS-----------SLSRVSS---SSPSST 175

 Frog   124 PREDRFHQEN-----------------GMSEVRV----------RQQR---EDGQRGSERNRSEH 158
            |.:...|..|                 ..:.|.|          :||:   :..|....:|.::|
  Fly   176 PTDSELHGSNSGGNLIGVQLGSMTLGPNANNVAVAGQILGNHYQQQQQHLLQQQQPLLHQNHNQH 240

 Frog   159 ---------------------SRRERQREEHKAVPQQPRGQEPSNKHRPPP----PDYPKDIPEK 198
                                 |:.....|:....||.|:.|.|     |||    |:..|.|..:
  Fly   241 HMGISQSHSYNFVGHTVSSSTSQHSSANEDDMLGPQHPQQQPP-----PPPVASRPERTKSIYTR 300

 Frog   199 RGTRSHEKGDGRREYPVND--------------------------RGYSEPVERVVKREKGEEKR 237
                           |:.|                          .|.|.|....:.........
  Fly   301 ---------------PIEDLQPAIIPMPVAPATTPATPLQNHRTPGGISAPAASPMMHNNATTTL 350

 Frog   238 PKSSYTSAEGSPQSPRDKRPLSG------------PSIRT-----PGSSSTEGVVKQTQTGRA-- 283
            .|:...:...||.:.:......|            ||..|     |..::..|.:.:|.|..|  
  Fly   351 DKNKNNATPTSPTTTKTTAETEGTDATSTLLSATNPSCSTTPTTDPAPAAPRGSLVETATAHATT 415

 Frog   284 -------------------FNTYPRAETDPSRGAPHQVPDSHSTVPLDS--KSTVSKSSSRPQQG 327
                               |:::|....|.  |..|.:|..|...|..|  .||||...:.|...
  Fly   416 AAATVATSTTTNHHSSASSFSSFPSFHDDD--GTHHALPTIHCPTPTSSSRNSTVSFPVAVPLPP 478

 Frog   328 QVKPKLPD----------KPHPTQLVPHSSDP-------QLSHPVQTQHPA---QPRSPQREPQR 372
            .|.|..|.          .|.||.....:..|       |::.|.....||   ..|:...:.::
  Fly   479 IVTPASPTPASIESPDLYTPEPTVAQVSAGGPSSQVAGNQIAVPQAAVAPAATPNTRAANAKKKK 543

 Frog   373 VSHEQFRAALQMVVDPGDPRTYLDNFIKIGEGSTGIVCIATIKSSGKLVAVKKMDLRKQQRRELL 437
            :|.|:....|:.:|..|||........|||:|::|.|..|...|:|..||:|:|:|.:|.::||:
  Fly   544 MSDEEILEKLRTIVSVGDPNRKYTKMEKIGQGASGTVYTAIESSTGMEVAIKQMNLSQQPKKELI 608

 Frog   438 FNEVVIMRDYQHENVVEMYNSYLVGDELWVIMEFLEGGALTDIVTHTRMNEEQIATVCVSVLKAL 502
            .||:::||:.:|.|||...:||||.:||||:||:|.||:|||:||.|.|:|.|||.||..||:||
  Fly   609 INEILVMRENKHPNVVNYLDSYLVSEELWVVMEYLPGGSLTDVVTETCMDEGQIAAVCREVLQAL 673

 Frog   503 SVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVNKEVPRRKSLVGTPYWMAPELISRLPYG 567
            ..|||..|||||||||:|||..||.|||:|||||||::.|..:|.::||||||||||:::|..||
  Fly   674 EFLHANQVIHRDIKSDNILLGLDGSVKLTDFGFCAQISPEQSKRTTMVGTPYWMAPEVVTRKQYG 738

 Frog   568 PEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNAQKVSPLLKGFLDRLLVRDPS 632
            |:||:||||||.||||:|||||.||.||||:.:|..|..|::|...|:|...:.|||:.|..:..
  Fly   739 PKVDLWSLGIMAIEMVEGEPPYLNENPLKALYLIATNGKPEIKEKDKLSSAFQDFLDQCLEVEVD 803

 Frog   633 QRASANELLKHPFLGKAGPPSCIVPLM 659
            :||||.:|||||||..|.|.:.:.||:
  Fly   804 RRASALDLLKHPFLKLARPLASLTPLI 830

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pak4XP_012823244.1 CRIB_PAK_like 24..70 CDD:238526 21/68 (31%)
PKc_like 374..665 CDD:389743 153/286 (53%)
PakNP_001138013.2 PBD 83..137 CDD:279166 22/53 (42%)
STKc_PAK_I 558..818 CDD:270814 144/259 (56%)
S_TKc 566..817 CDD:214567 140/250 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D757766at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.