DRSC/TRiP Functional Genomics Resources

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Protein Alignment si:dkey-33c12.12 and NMA111

DIOPT Version :10

Sequence 1:NP_001082916.2 Gene:si:dkey-33c12.12 / 100000024 ZFINID:ZDB-GENE-081028-30 Length:214 Species:Danio rerio
Sequence 2:NP_014276.1 Gene:NMA111 / 855600 SGDID:S000005067 Length:997 Species:Saccharomyces cerevisiae


Alignment Length:200 Identity:51/200 - (25%)
Similarity:90/200 - (45%) Gaps:23/200 - (11%)


- Green bases have known domain annotations that are detailed below.


Zfish     1 MGSPFSLKNTITSGIISSAQRGSKELG---LSNSNMDYIQTDATIDFGNSGGPLINLDGEVIGIN 62
            :|:....|.:|.:|.||...|.:.|.|   .::.|.:|||..|:...|:||.|::|:||..:.:.
Yeast   187 VGNDAGEKLSILAGFISRIDRNAPEYGELTYNDFNTEYIQAAASASGGSSGSPVVNIDGYAVALQ 251

Zfish    63 TMKVT-AGISFAIPLGRV-RLFLDRSADK-------QKSWFGESGWKRRYIGVMMLTLTPSIIEE 118
            ....| |...|.:||.|: |..:....:|       |..|.     .:.|.....|.||.....|
Yeast   252 AGGSTEASTDFFLPLDRILRALICIQTNKPITRGTIQVQWL-----LKPYDECRRLGLTSERESE 311

Zfish   119 LRMRDPSFPDISHGVLIHRVIVGSPANRAGMKPGDVIIEINGVKVNTSEEI--YNAVRTSESLNV 181
            .|.:   ||: :.|:|:...::........:|.||.:|.|||..:::..::  .......:.:.:
Yeast   312 ARAK---FPE-NIGLLVAETVLREGPGYDKIKEGDTLISINGETISSFMQVDKIQDENVGKEIQL 372

Zfish   182 VVRRG 186
            |::||
Yeast   373 VIQRG 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
si:dkey-33c12.12NP_001082916.2 DegQ <1..197 CDD:440035 50/199 (25%)
cpPDZ_HtrA-like 101..198 CDD:467624 19/87 (22%)
NMA111NP_014276.1 DUF5923 <42..91 CDD:466049
DegQ 102..390 CDD:440035 50/199 (25%)
cpPDZ1_ScNma111-like 299..387 CDD:467625 18/82 (22%)
PDZ_1 392..469 CDD:372324
DegQ 572..865 CDD:440035
cpPDZ3_ScNma111-like 772..862 CDD:467627
PDZ2-4_Nma111p-like 871..950 CDD:467617
Blue background indicates that the domain is not in the aligned region.

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